CDS

Accession Number TCMCG047C26366
gbkey CDS
Protein Id GFQ04932.1
Location complement(join(18453..18957,18994..19715))
Organism Phtheirospermum japonicum
locus_tag PHJA_002637300

Protein

Length 408aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJDB3858 BioSample:SAMD00029051
db_source BMAC01000993.1
Definition nuclear pore complex protein nup50a [Phtheirospermum japonicum]
Locus_tag PHJA_002637300

EGGNOG-MAPPER Annotation

COG_category U
Description NUP50 (Nucleoporin 50 kDa)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K15304        [VIEW IN KEGG]
EC -
KEGG_Pathway ko05166        [VIEW IN KEGG]
map05166        [VIEW IN KEGG]
GOs GO:0000054        [VIEW IN EMBL-EBI]
GO:0000056        [VIEW IN EMBL-EBI]
GO:0000082        [VIEW IN EMBL-EBI]
GO:0000226        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006606        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007017        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007051        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008536        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0017016        [VIEW IN EMBL-EBI]
GO:0017038        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0031267        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031935        [VIEW IN EMBL-EBI]
GO:0031938        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0033750        [VIEW IN EMBL-EBI]
GO:0034504        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044770        [VIEW IN EMBL-EBI]
GO:0044772        [VIEW IN EMBL-EBI]
GO:0044843        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051020        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051170        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051656        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060968        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071428        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1902275        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTGATGCGGAAAACAACTCGCAACCTTCCAAAAAGAGAGCTGCTAGAGTTCAACTATCTCGTGACAACCCTGGTCTCGACGACAATGAAGACTCATCTGAGCAAGAGGCGGGGACTTTCAAAAGGGCGAGCGACGAGGTTTTAGCCACACGAAGAATCGTGAAGGTCCGTCGTCCGCCGACATCATCATCAGCCCAGGCCCCACCCGCTTCTTCTAATCCGTTCGCTGCTATCCGATTGGTCACCAGTGGCCAGAATCAAGAAACCGAGCAAACTGATGACATCATCCAATCTGAAAATAAGGCCGATGAGGCGAAAGGTGATGGTGTCATCAAATCTGAAAACAAGGTTGATGAGGCGAGAGGTGATGACATCATCAAATCTGAAAATAAGGCTGACGAGACGAAAGGTGATGATGTCATCAAATCTGCAAAACCTAAGAGCAAAGTAGATGATCACTTGGAAGCCGAACTTAATGCTCAGAAGGATAAAACTGAGCCGGCTGAGGTGAAAAATGCTACAGAAGGTGATAATAGTGAGACTAATGTGAGTAAGGATTTAAAAGACGAGAAAAAGGAAAGCGGGGATGAAAATGCTCCCAAAAATGAAGAAACTTCCTCGTTCAGCTCGTTTCAAAACTTATCGAGTGGACAAAATGCTTTCTCCGGGATTACTGGAACGGGATTTTCTAGTTCCTCGTTCTCGTTCGGATCTCTCTCGAACGATAACTCTTCTATTTTCGGCAGCTCCGCATCGAACTCTGTTATTACAAAGAGCGAGGGCAGTAAATTTCCTCCCATGCAGGAGGTCTCTGTGGAGACGGGCGAAGAAAATGAGAAAGCTGTTTTTACTGCTGACTCGGCACTTTTTGAGTTTACCGATGGATCTTGGAAGGAACGAGGGAAGGGTGAGCTTAAGGTTAATGTTCCAACTGGTGGGGCTGGGAAGGCCCGACTCGTTATGAGGGCCCGAGGGAATTATCGGTTGATATTGAATGCTAGTCTTTTTCCGGATATGAAGCTGACGAATATGGAAAAGAAAGGTGTTACGTTCGCGTGTGTGAATAGCGCTAGTGAAGTGAAAAATGGGCTTTCGACGATCGCATTGAAGTTTAAGGATGCTTCGTTTGTTGAGGATTTTCGAGCGGCTGTTATGGAGCATAAAGCTAAGAGTGGTGTGGCTTTGAAAACCCCTGAAAATTCTCCAAAGGTATCGGATGAGTAA
Protein:  
MGDAENNSQPSKKRAARVQLSRDNPGLDDNEDSSEQEAGTFKRASDEVLATRRIVKVRRPPTSSSAQAPPASSNPFAAIRLVTSGQNQETEQTDDIIQSENKADEAKGDGVIKSENKVDEARGDDIIKSENKADETKGDDVIKSAKPKSKVDDHLEAELNAQKDKTEPAEVKNATEGDNSETNVSKDLKDEKKESGDENAPKNEETSSFSSFQNLSSGQNAFSGITGTGFSSSSFSFGSLSNDNSSIFGSSASNSVITKSEGSKFPPMQEVSVETGEENEKAVFTADSALFEFTDGSWKERGKGELKVNVPTGGAGKARLVMRARGNYRLILNASLFPDMKLTNMEKKGVTFACVNSASEVKNGLSTIALKFKDASFVEDFRAAVMEHKAKSGVALKTPENSPKVSDE